Introduction to Bioinformatics
This page contains an uncompressed copy of example code from your course text, downloaded on
January 15, 2003. Please see the
official Beginning Perl for Bioinformatics
Website under the heading "Examples and Exercises" for any updates to this code.
General files
Chapter 4
NOTE: Examples 4-5 to 4-7 also require the protein sequence data file: NM_021964fragment.pep.txt - To match
the example in your book, save the file out with the name: NM_021964fragment.pep
Chapter 5
NOTE: Example 5-3 also requires the protein sequence data file: NM_021964fragment.pep.txt - To match
the example in your book, save the file out with the name: NM_021964fragment.pep
NOTE: Example 5-4, 5-6 and 5-7 also require the DNA file: small.dna.txt - To match the example in your book, save the file out with the name: small.dna
Chapter 6
Chapter 7
Chapter 8
NOTE: Example 8-2,8-3 and 8-4 also require the DNA file: sample.dna.txt
- To match the example in your book, save the file out with the name: sample.dna
Chapter 9